Right on, there is usually enough play in the neck bolts to give you some leeway in centering everything and getting the strings parallel to the fretboard edges. Sometimes I find it helpful to loosen the
locking nut entirely and slide it as far to the top of the fretboard as possible, helps keep that high E from falling off the fretboard when doing vibrato.
String her up and see what happens...when you loosen the neck bolts you don't have loosen very much, but be careful with those old style
neck joints as well, too much tweaking and you could get that tell tale hairline crack, just don't go ape on it.