Independent tone for JPM wiring

[nlinny]

Anybody know how you would wire two independent tone controls into JPM type circuit? I am actually using a 3-way tele switch instead of the Dimarzio toggle, but the coil selects are the same (i.e bridge humbucker/inside coils/neck humbucker).
I currently have a tone control wired to the switch where the leads for the two coils of the humbucker are tied together. So, there is pot each for both the neck and bridge pickups.

-In the middle position of the switch, the tone controls seem to function correctly; rolling back each pot rolls off the treble for each coil.

-In either the bridge or neck position, rolling back their respective pot seems to only roll off the treble of one coil. It is as if the resonant frequency of the pickup changes, I still get the treble, but something in the midrange rolls off. It actually sounds pretty cool to me but for the neck pickup, I'm looking for the traditional treble rolloff.

Please note that I am looking for TWO independent tone controls so that I can say, preset the neck with the treble rolled off and go from bridge with full treble to neck with no treble using the switch only (not switch followed by tone control).

Thanks!
-Nelson